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PCR Cleanup
We use primarily ExoSAP-IT© for PCR Product Clean-Up for standard cleanup of successful PCR.
Alternatively we occasionally use a gel purification and isolation technique in which case we use the Gene Clean method
- Run standard gel (~1.5%) with 1X TAE (TBE does not work as well)
- Cut out band using clean razor blade
- Weigh agarose in mg
- Add 3X agarose weight in microliters of NaI
- Incubate 5-10 min at 55oC until agarose is thoroughly dissolved
- Suspend Glass Milk by thorough vortexing
- Add 5 l Glass Milk to agarose solution
- Mix by inverting and vortexing
- Place on ice for 5 min vortexing about every 2 min
- Centrifuge tube on high 5 sec
- Pipette off supernatant
- Keep tubes on ice as much as possible. Add 600 l of cold New Wash, and resuspend pellet by vortexing. (note: store New Wash tightly sealed at -20ºC)
- Centrifuge tube on high 15 sec
- Pipette off supernatant
- Go to step 12 two more times
- Air dry for 15-20 min
- Resusped in 12 l TE buffer or ultra-pure H2O
- Incubate ate 45 -55oC for 3 min
- Centrifuge 30 sec
- Remove supernatant (with DNA) into clean tube
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Kelly B. Miller Lab, Department of Biology, University of New Mexico, 167 Castetter Hall, MSC03 2020, Albuquerque, NM 87131-0001 USA
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